Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817467.1_cds_XP_016499195.1_13143
CDS Infomation

[gene=LOC107817826] [db_xref=GeneID:107817826] [protein=thiamine biosynthetic bifunctional enzyme TH1, chloroplastic-like] [protein_id=XP_016499195.1] [location=join(5614..5736,5962..6234,6311..6385,7438..7513,7587..7662,8078..8212,9310..9374,9508..9635,10534..10778,11500..12022)] [gbkey=CDS]
Sequence

ATGAGATACGTCCAAATACCCGTACCCGTGAACTCTCCACTTCCAAAAGCTTCATCCATT
TCTCATATGGCGTATTTCTGCTCTCAGGTTCTATCCACTTCCTTCTTCACTCCAAAATCT
CAGATTCCAGTGCTGTTGAATCCAGGCGTAGCCTGCATCAAAAGCTTTCATCAATATAGG
TTTTTGCATATTAAGGCAATGCAGGGCGATAAGGTTTCCACGCCTACGCCGTCCGATGAG
TGCATGGTTAGAGTCCCGCATGTTCTGACGGTTGCCGGCTCCGATTCCGGCGCCGGAGCG
GGAATTCAAGCGGATCTCAAGGCTTGTGCTGCTCGGGGAGTTTATTGCTCCACTGTGATC
ACTGCTGTTACTGCTCAAAACACCGTAGGGGTTCAGGGTGTGAACATTGTGCCAGAAGAT
TTTGTGGCGGAGCAGTTGAGGTCGGTGCTTTCCGATATGCATCCCGACGTGGTGAAAACA
GGCATGCTTCCGTCAATTGGCATAGTGAAAACCCTCTGTCAAAGTCTGAAGGAATTCCCA
GTACAAGCCTTGGTGGTTGACCCTGTTATGGTATCCACAAGTGGACATACGTTAGCTGGT
CCCTCTATTTTGGATATCTTTAGGGAGGAGCTTCTTCCCATGGCTGATATAGCGACCCCA
AATTTGAAAGAGGCTTCCGCTTTACTAGGTGGTGTGCCATTGGAAACAATTGCTGACATG
CGTTATGCTGCAAAAGCTATACATGACATTGGTCCAAGAAATGTACTTGTGAAAGGAGGC
GATCTCCCTGCTTCCCTTGATGCTGTGGATGTGTTTTATGATGGGAAGGATTTCTATGAG
TTTCGGTCATCACGCATAATGACACCAAATACTCATGGAACTGGCTGCACTTTGGCTTCT
TCTGTCGCAGCTGAGCTAGCAAAGGGTTCTCAAATGCTTTCTGCTGTTAAGGTAGCTAAA
CGCTACATTGAAGCAGCCTTGTCTTATAGTAAGAACATCGCCATTGGAGGTGGGCGTCAA
GGTCCTATGGATCATCTTTTGAAGCTTAAGAGTAACGTGCAGCGACGACCTTTTGATCCT
TGTGATCTCTTTCTGTATGCTGTCACTGACTCCAGGATGAACGAAAGGTGGGGTCGTTCA
ATAGTTGATGCGGTAAAGGCTGCCTTAGAAGGAGGTGCCTCCATTATTCAGCTGAGGGAA
AAGGAGGTTGAAACTAGTGATTTTCTGGAAGCAGCAAAAGCTTGTTTAAAAATCTGCAGA
GTTCATGGTGTTCCTCTGCTGATCAATGACAGGATTGATGTAGCTCTTGCTAGTGATGCT
GATGGTGTTCATATTGGGCAGTCCGACATGCCTGCTCATGTTGCACGGGTTCTTCTTGGG
CCTGACAAAATCATTGGTGTATCATGCAAAACACCGGAGCACGCCCAGCAAGCATGGATA
GATGGGGCTGATTACATTGGCTCTGGCGGTGTATATCCAACTAATACCAAAGAGAACAAT
AAGACGATTGGTTTGGATGGCCTGAAAACTGTTTGTTTGTCATCCAAATTACCAGTTGTA
GCCATTGGCGGCATAGGCATCTCTAATGCTCAGGCTGTAATGGGACTAGGGGTCCCAAAC
CTGAAAGGCGTTGCTGTTGTATCTGCTCTATTTGATAGGGAATGTGTTTTGACAGAAACC
AGAAAGTTACTCGAGGTGCTCAAGGAGTCAACCAAATGA

Peptide Sequence

PEP ID

XP_016499195.1
PEP Infomation

PREDICTED: thiamine biosynthetic bifunctional enzyme TH1, chloroplastic-like [Nicotiana tabacum]
Sequence

MRYVQIPVPVNSPLPKASSISHMAYFCSQVLSTSFFTPKSQIPVLLNPGVACIKSFHQYR
FLHIKAMQGDKVSTPTPSDECMVRVPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVI
TAVTAQNTVGVQGVNIVPEDFVAEQLRSVLSDMHPDVVKTGMLPSIGIVKTLCQSLKEFP
VQALVVDPVMVSTSGHTLAGPSILDIFREELLPMADIATPNLKEASALLGGVPLETIADM
RYAAKAIHDIGPRNVLVKGGDLPASLDAVDVFYDGKDFYEFRSSRIMTPNTHGTGCTLAS
SVAAELAKGSQMLSAVKVAKRYIEAALSYSKNIAIGGGRQGPMDHLLKLKSNVQRRPFDP
CDLFLYAVTDSRMNERWGRSIVDAVKAALEGGASIIQLREKEVETSDFLEAAKACLKICR
VHGVPLLINDRIDVALASDADGVHIGQSDMPAHVARVLLGPDKIIGVSCKTPEHAQQAWI
DGADYIGSGGVYPTNTKENNKTIGLDGLKTVCLSSKLPVVAIGGIGISNAQAVMGLGVPN
LKGVAVVSALFDRECVLTETRKLLEVLKESTK

Transcript Sequence

Gene sequence data has not been registered.